Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR9Q9NR96 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR9Q9NR96 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.9■□□□□ 0.62
TLR9Q9NR96 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR9Q9NR96 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.9■□□□□ 0.62
TLR9Q9NR96 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TLR9Q9NR96 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TLR9Q9NR96 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TLR9Q9NR96 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TLR9Q9NR96 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TLR9Q9NR96 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 MCCD1P2-201ENST00000423228 335 ntBASIC18.89■□□□□ 0.61
TLR9Q9NR96 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 AC244107.1-201ENST00000442033 332 ntBASIC18.89■□□□□ 0.61
TLR9Q9NR96 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR9Q9NR96 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TLR9Q9NR96 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TLR9Q9NR96 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TLR9Q9NR96 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 AL589182.2-201ENST00000619332 1049 ntBASIC18.88■□□□□ 0.61
TLR9Q9NR96 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR9Q9NR96 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR9Q9NR96 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR9Q9NR96 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR9Q9NR96 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR9Q9NR96 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR9Q9NR96 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR9Q9NR96 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TLR9Q9NR96 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR9Q9NR96 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR9Q9NR96 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 AC103564.2-201ENST00000432853 1299 ntBASIC18.87■□□□□ 0.61
TLR9Q9NR96 KRT18P2-201ENST00000447938 1258 ntBASIC18.87■□□□□ 0.61
TLR9Q9NR96 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TLR9Q9NR96 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 AC005829.1-201ENST00000570002 483 ntBASIC18.87■□□□□ 0.61
TLR9Q9NR96 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TLR9Q9NR96 ANO7L1-203ENST00000602586 1720 ntBASIC18.87■□□□□ 0.61
TLR9Q9NR96 AL596442.2-201ENST00000610240 980 ntBASIC18.87■□□□□ 0.61
TLR9Q9NR96 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 AC002310.6-201ENST00000624451 1377 ntBASIC18.87■□□□□ 0.61
TLR9Q9NR96 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR9Q9NR96 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR9Q9NR96 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TLR9Q9NR96 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TLR9Q9NR96 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms