Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 LINC00265-3P-201ENST00000447588 903 ntBASIC16.86■□□□□ 0.29
KLHL1Q9NR64 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.86■□□□□ 0.29
KLHL1Q9NR64 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 AP000867.3-201ENST00000524675 377 ntBASIC16.85■□□□□ 0.29
KLHL1Q9NR64 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 AC009065.1-201ENST00000564055 1225 ntBASIC16.85■□□□□ 0.29
KLHL1Q9NR64 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 MIR3180-4-201ENST00000582223 153 ntBASIC16.85■□□□□ 0.29
KLHL1Q9NR64 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 KRT8P50-201ENST00000562022 1438 ntBASIC16.85■□□□□ 0.29
KLHL1Q9NR64 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL1Q9NR64 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 AC068880.1-201ENST00000507289 2297 ntBASIC16.84■□□□□ 0.29
KLHL1Q9NR64 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 TPM4P1-201ENST00000436100 807 ntBASIC16.84■□□□□ 0.29
KLHL1Q9NR64 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 IGHV3-41-201ENST00000613121 348 ntBASIC16.84■□□□□ 0.29
KLHL1Q9NR64 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms