Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.43■□□□□ 0.38
CLK4Q9HAZ1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 AC009102.3-201ENST00000623118 1491 ntBASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 AC135776.1-201ENST00000319817 2481 ntBASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK4Q9HAZ1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 PKD1P1-201ENST00000458669 6805 ntBASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 AL157888.1-201ENST00000631930 593 ntBASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK4Q9HAZ1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 MIR1224-201ENST00000408193 85 ntBASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms