Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRF2Q9HAW0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 LINC01311-201ENST00000565162 1445 ntBASIC17.1■□□□□ 0.33
BRF2Q9HAW0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 AC020916.1-201ENST00000587762 1774 ntBASIC17.1■□□□□ 0.33
BRF2Q9HAW0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
BRF2Q9HAW0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 AC104076.2-201ENST00000448912 469 ntBASIC17.09■□□□□ 0.33
BRF2Q9HAW0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 LINC01238-205ENST00000567549 1107 ntBASIC17.09■□□□□ 0.33
BRF2Q9HAW0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRF2Q9HAW0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRF2Q9HAW0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRF2Q9HAW0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRF2Q9HAW0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
BRF2Q9HAW0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRF2Q9HAW0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.08■□□□□ 0.33
BRF2Q9HAW0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 VENTXP5-201ENST00000523979 775 ntBASIC17.08■□□□□ 0.32
BRF2Q9HAW0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 AL390719.2-201ENST00000606993 987 ntBASIC17.08■□□□□ 0.32
BRF2Q9HAW0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 HTR7P1-202ENST00000624664 4411 ntBASIC17.08■□□□□ 0.32
BRF2Q9HAW0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRF2Q9HAW0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms