Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 LAGE3P1-201ENST00000425356 484 ntBASIC18.41■□□□□ 0.54
BRD9Q9H8M2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 DNAJB3-201ENST00000446806 729 ntBASIC18.41■□□□□ 0.54
BRD9Q9H8M2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRD9Q9H8M2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 RPSAP43-201ENST00000402237 625 ntBASIC18.4■□□□□ 0.54
BRD9Q9H8M2 GPX1P2-201ENST00000429271 606 ntBASIC18.4■□□□□ 0.54
BRD9Q9H8M2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 AP000867.4-201ENST00000641616 219 ntBASIC18.4■□□□□ 0.54
BRD9Q9H8M2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
BRD9Q9H8M2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.39■□□□□ 0.54
BRD9Q9H8M2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 YBX2P1-201ENST00000394192 760 ntBASIC18.39■□□□□ 0.53
BRD9Q9H8M2 RPS8P6-201ENST00000426177 609 ntBASIC18.39■□□□□ 0.53
BRD9Q9H8M2 AC007967.2-201ENST00000432613 625 ntBASIC18.39■□□□□ 0.53
BRD9Q9H8M2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 AC079781.4-201ENST00000641908 219 ntBASIC18.39■□□□□ 0.53
BRD9Q9H8M2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
BRD9Q9H8M2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 WIZP1-201ENST00000531444 2299 ntBASIC18.38■□□□□ 0.53
BRD9Q9H8M2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 AC007967.3-201ENST00000434308 558 ntBASIC18.38■□□□□ 0.53
BRD9Q9H8M2 BX005266.1-201ENST00000473402 457 ntBASIC18.38■□□□□ 0.53
BRD9Q9H8M2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.38■□□□□ 0.53
BRD9Q9H8M2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.38■□□□□ 0.53
BRD9Q9H8M2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRD9Q9H8M2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRD9Q9H8M2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms