Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 ESPNP-201ENST00000270691 2015 ntBASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 IL9RP2-201ENST00000423948 1312 ntBASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATXN3LQ9H3M9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 AC073592.3-201ENST00000625118 1834 ntBASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 AF228730.7-201ENST00000641842 219 ntBASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATXN3LQ9H3M9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 ABCD1P5-201ENST00000445663 754 ntBASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms