Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 ING3-202ENST00000339121 1222 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 IGHGP-201ENST00000390555 1178 ntBASIC19.95■□□□□ 0.78
RNF39Q9H2S5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AGGF1P5-201ENST00000567900 919 ntBASIC19.95■□□□□ 0.78
RNF39Q9H2S5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AC022960.3-201ENST00000619794 441 ntBASIC19.95■□□□□ 0.78
RNF39Q9H2S5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AL356596.1-201ENST00000624230 379 ntBASIC19.95■□□□□ 0.78
RNF39Q9H2S5 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 AP000593.1-201ENST00000393668 712 ntBASIC19.94■□□□□ 0.78
RNF39Q9H2S5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 RNU6-751P-201ENST00000516382 101 ntBASIC19.94■□□□□ 0.78
RNF39Q9H2S5 ASB8-215ENST00000540782 659 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF39Q9H2S5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 TFAM-201ENST00000373895 973 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 DRAXINP1-201ENST00000437611 948 ntBASIC19.93■□□□□ 0.78
RNF39Q9H2S5 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 AC023158.1-201ENST00000561632 1025 ntBASIC19.93■□□□□ 0.78
RNF39Q9H2S5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 GPR32P1-201ENST00000601788 811 ntBASIC19.93■□□□□ 0.78
RNF39Q9H2S5 AC080080.2-201ENST00000624307 590 ntBASIC19.93■□□□□ 0.78
RNF39Q9H2S5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 ANKRD66-202ENST00000565422 1346 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF39Q9H2S5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms