Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH11XQ9BZA7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDH11XQ9BZA7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH11XQ9BZA7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH11XQ9BZA7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
PCDH11XQ9BZA7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH11XQ9BZA7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH11XQ9BZA7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH11XQ9BZA7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 CYMP-203ENST00000474680 1263 ntBASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 CD63-210ENST00000550776 870 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 STK25P1-201ENST00000585406 838 ntBASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
PCDH11XQ9BZA7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 ELL2P1-201ENST00000413990 1906 ntBASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 AL096828.2-201ENST00000567259 1965 ntBASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 CNN2P11-201ENST00000429351 262 ntBASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 PDPK2P-202ENST00000562415 1191 ntBASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 AC109462.3-201ENST00000573934 613 ntBASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 AC010507.1-201ENST00000633895 436 ntBASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH11XQ9BZA7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 MRPL20P1-201ENST00000400819 433 ntBASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 ATP6V0CP3-201ENST00000417255 467 ntBASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH11XQ9BZA7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 CROCCP3-202ENST00000420820 1947 ntBASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH11XQ9BZA7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 CD82-202ENST00000342935 967 ntTSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms