Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 AC093010.1-201ENST00000473625 1624 ntBASIC6.07□□□□□ -1.44
KRTAP4-3Q9BYR4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AC009949.1-201ENST00000623048 1830 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AC073592.3-201ENST00000625118 1834 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 MED22-202ENST00000371999 987 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 KRT18P65-201ENST00000439811 1286 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AP001005.1-201ENST00000571755 1248 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 NKAPP1-205ENST00000585790 367 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AC011467.2-201ENST00000598425 242 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AC090164.3-201ENST00000610780 2143 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AL355877.3-201ENST00000622820 899 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AC116407.3-201ENST00000623905 1129 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 AL138781.2-201ENST00000617896 1843 ntBASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRTAP4-3Q9BYR4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms