Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.13■□□□□ 0.33
BARD1Q99728 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BARD1Q99728 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.13■□□□□ 0.33
BARD1Q99728 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.13■□□□□ 0.33
BARD1Q99728 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
BARD1Q99728 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 TSSC2-201ENST00000450217 709 ntBASIC17.13■□□□□ 0.33
BARD1Q99728 KRT17P6-201ENST00000453795 1220 ntBASIC17.13■□□□□ 0.33
BARD1Q99728 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
BARD1Q99728 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
BARD1Q99728 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.13■□□□□ 0.33
BARD1Q99728 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
BARD1Q99728 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.13■□□□□ 0.33
BARD1Q99728 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BARD1Q99728 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
BARD1Q99728 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BARD1Q99728 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.12■□□□□ 0.33
BARD1Q99728 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.12■□□□□ 0.33
BARD1Q99728 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.12■□□□□ 0.33
BARD1Q99728 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.12■□□□□ 0.33
BARD1Q99728 SLC25A6P5-201ENST00000435663 894 ntBASIC17.12■□□□□ 0.33
BARD1Q99728 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.12■□□□□ 0.33
BARD1Q99728 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.12■□□□□ 0.33
BARD1Q99728 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.12■□□□□ 0.33
BARD1Q99728 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.12■□□□□ 0.33
BARD1Q99728 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.12■□□□□ 0.33
BARD1Q99728 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 PRORSD1P-202ENST00000563365 2154 ntBASIC17.12■□□□□ 0.33
BARD1Q99728 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
BARD1Q99728 PP12613-201ENST00000424958 2230 ntBASIC17.12■□□□□ 0.33
BARD1Q99728 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BARD1Q99728 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.12■□□□□ 0.33
BARD1Q99728 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.11■□□□□ 0.33
BARD1Q99728 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BARD1Q99728 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.11■□□□□ 0.33
BARD1Q99728 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.11■□□□□ 0.33
BARD1Q99728 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
BARD1Q99728 FAAHP1-202ENST00000446499 1238 ntBASIC17.11■□□□□ 0.33
BARD1Q99728 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.11■□□□□ 0.33
BARD1Q99728 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.11■□□□□ 0.33
BARD1Q99728 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BARD1Q99728 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
BARD1Q99728 AL121672.3-201ENST00000608644 468 ntBASIC17.11■□□□□ 0.33
BARD1Q99728 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.11■□□□□ 0.33
BARD1Q99728 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms