Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 AC093503.3-201ENST00000624917 2352 ntBASIC13.91□□□□□ -0.18
DUX3Q96PT4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 AC008687.5-201ENST00000593746 558 ntBASIC13.91□□□□□ -0.18
DUX3Q96PT4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 GMCL1P1-201ENST00000463439 1581 ntBASIC13.91□□□□□ -0.18
DUX3Q96PT4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX3Q96PT4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.91□□□□□ -0.18
DUX3Q96PT4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 AC009078.2-202ENST00000463353 338 ntBASIC13.9□□□□□ -0.18
DUX3Q96PT4 AC068472.1-201ENST00000474589 881 ntBASIC13.9□□□□□ -0.18
DUX3Q96PT4 AC113404.2-201ENST00000507884 177 ntBASIC13.9□□□□□ -0.18
DUX3Q96PT4 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 WIZP1-201ENST00000531444 2299 ntBASIC13.9□□□□□ -0.18
DUX3Q96PT4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX3Q96PT4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX3Q96PT4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
DUX3Q96PT4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.9□□□□□ -0.19
DUX3Q96PT4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
DUX3Q96PT4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 BNIP3P18-201ENST00000593976 575 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms