Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF48Q96MX3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 AC018712.1-201ENST00000455767 687 ntBASIC14.53□□□□□ -0.08
ZNF48Q96MX3 FGFR3P6-201ENST00000457012 610 ntBASIC14.53□□□□□ -0.08
ZNF48Q96MX3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 AL049840.3-201ENST00000602669 611 ntBASIC14.53□□□□□ -0.08
ZNF48Q96MX3 AL138831.2-201ENST00000606564 490 ntBASIC14.53□□□□□ -0.08
ZNF48Q96MX3 AP001269.4-201ENST00000609611 512 ntBASIC14.53□□□□□ -0.08
ZNF48Q96MX3 AC006538.3-201ENST00000612495 578 ntBASIC14.53□□□□□ -0.08
ZNF48Q96MX3 AL355877.3-201ENST00000622820 899 ntBASIC14.53□□□□□ -0.08
ZNF48Q96MX3 LTB4R2-202ENST00000528054 3092 ntBASIC14.53□□□□□ -0.08
ZNF48Q96MX3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF48Q96MX3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 AC243591.1-201ENST00000452967 1364 ntBASIC14.52□□□□□ -0.08
ZNF48Q96MX3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF48Q96MX3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 MIR574-201ENST00000385209 96 ntBASIC14.52□□□□□ -0.09
ZNF48Q96MX3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 AC009533.2-201ENST00000543664 586 ntBASIC14.52□□□□□ -0.09
ZNF48Q96MX3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 GPALPP1-207ENST00000611650 899 ntBASIC14.52□□□□□ -0.09
ZNF48Q96MX3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 INTS4P1-201ENST00000438455 1935 ntBASIC14.52□□□□□ -0.09
ZNF48Q96MX3 ABALON-201ENST00000629058 1903 ntBASIC14.52□□□□□ -0.09
ZNF48Q96MX3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF48Q96MX3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms