Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 AL691432.3-201ENST00000621860 400 ntBASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PRICKLE1Q96MT3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 TP73-AS1-210ENST00000637775 1455 ntBASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE1Q96MT3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 AC100803.2-201ENST00000562459 1963 ntBASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 AKR1C7P-201ENST00000305623 895 ntBASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms