Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 BCAR1-209ENST00000546196 1340 ntBASIC17.97■□□□□ 0.47
SHDQ96IW2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SHDQ96IW2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SHDQ96IW2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.96■□□□□ 0.47
SHDQ96IW2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SHDQ96IW2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
SHDQ96IW2 AC003669.1-201ENST00000334569 611 ntBASIC17.96■□□□□ 0.47
SHDQ96IW2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SHDQ96IW2 KLF4P1-201ENST00000412782 1185 ntBASIC17.96■□□□□ 0.47
SHDQ96IW2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.96■□□□□ 0.47
SHDQ96IW2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.96■□□□□ 0.47
SHDQ96IW2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.96■□□□□ 0.47
SHDQ96IW2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.96■□□□□ 0.47
SHDQ96IW2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.96■□□□□ 0.47
SHDQ96IW2 AC004835.2-201ENST00000603762 682 ntBASIC17.96■□□□□ 0.47
SHDQ96IW2 AC027612.4-201ENST00000605371 583 ntBASIC17.96■□□□□ 0.47
SHDQ96IW2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SHDQ96IW2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.96■□□□□ 0.47
SHDQ96IW2 AC093028.1-201ENST00000622998 982 ntBASIC17.96■□□□□ 0.47
SHDQ96IW2 AC007064.4-201ENST00000637740 555 ntBASIC17.96■□□□□ 0.47
SHDQ96IW2 AL805961.1-202ENST00000641562 540 ntBASIC17.96■□□□□ 0.47
SHDQ96IW2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SHDQ96IW2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHDQ96IW2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHDQ96IW2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHDQ96IW2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHDQ96IW2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.95■□□□□ 0.46
SHDQ96IW2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.95■□□□□ 0.46
SHDQ96IW2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.95■□□□□ 0.46
SHDQ96IW2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.95■□□□□ 0.46
SHDQ96IW2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.95■□□□□ 0.46
SHDQ96IW2 AC074386.1-202ENST00000463561 864 ntBASIC17.95■□□□□ 0.46
SHDQ96IW2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.95■□□□□ 0.46
SHDQ96IW2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.95■□□□□ 0.46
SHDQ96IW2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.95■□□□□ 0.46
SHDQ96IW2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.95■□□□□ 0.46
SHDQ96IW2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SHDQ96IW2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.95■□□□□ 0.46
SHDQ96IW2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SHDQ96IW2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.95■□□□□ 0.46
SHDQ96IW2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SHDQ96IW2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.95■□□□□ 0.46
SHDQ96IW2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.95■□□□□ 0.46
SHDQ96IW2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.95■□□□□ 0.46
SHDQ96IW2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.95■□□□□ 0.46
SHDQ96IW2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.95■□□□□ 0.46
SHDQ96IW2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.95■□□□□ 0.46
SHDQ96IW2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHDQ96IW2 AL049812.1-201ENST00000432563 2267 ntBASIC17.95■□□□□ 0.46
SHDQ96IW2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SHDQ96IW2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SHDQ96IW2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHDQ96IW2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHDQ96IW2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.94■□□□□ 0.46
SHDQ96IW2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHDQ96IW2 AC007952.6-201ENST00000573168 2673 ntBASIC17.94■□□□□ 0.46
SHDQ96IW2 AC003957.1-201ENST00000625108 2673 ntBASIC17.94■□□□□ 0.46
SHDQ96IW2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHDQ96IW2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHDQ96IW2 FAM58CP-201ENST00000435741 640 ntBASIC17.94■□□□□ 0.46
SHDQ96IW2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.94■□□□□ 0.46
SHDQ96IW2 DDX43P3-201ENST00000441064 443 ntBASIC17.94■□□□□ 0.46
SHDQ96IW2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHDQ96IW2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.94■□□□□ 0.46
SHDQ96IW2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
SHDQ96IW2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.94■□□□□ 0.46
SHDQ96IW2 KRT19P2-202ENST00000557173 1012 ntBASIC17.94■□□□□ 0.46
SHDQ96IW2 AC025678.2-201ENST00000562061 970 ntBASIC17.94■□□□□ 0.46
SHDQ96IW2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.94■□□□□ 0.46
SHDQ96IW2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.94■□□□□ 0.46
SHDQ96IW2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHDQ96IW2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHDQ96IW2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHDQ96IW2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SHDQ96IW2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHDQ96IW2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHDQ96IW2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.94■□□□□ 0.46
SHDQ96IW2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.94■□□□□ 0.46
SHDQ96IW2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms