Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 PHGDH-209ENST00000641074 1780 ntBASIC18.44■□□□□ 0.54
IFT43Q96FT9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 AC092597.1-201ENST00000487352 616 ntBASIC18.43■□□□□ 0.54
IFT43Q96FT9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 AL136038.4-201ENST00000603606 1261 ntBASIC18.43■□□□□ 0.54
IFT43Q96FT9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
IFT43Q96FT9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFT43Q96FT9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 DUSP5P1-201ENST00000441325 1139 ntBASIC18.42■□□□□ 0.54
IFT43Q96FT9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 REXO1L9P-201ENST00000604264 2108 ntBASIC18.42■□□□□ 0.54
IFT43Q96FT9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 AL391807.1-203ENST00000604392 2365 ntBASIC18.42■□□□□ 0.54
IFT43Q96FT9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
IFT43Q96FT9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFT43Q96FT9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 AL096828.2-201ENST00000567259 1965 ntBASIC18.41■□□□□ 0.54
IFT43Q96FT9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.41■□□□□ 0.54
IFT43Q96FT9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 AL450487.1-201ENST00000426799 995 ntBASIC18.41■□□□□ 0.54
IFT43Q96FT9 HLA-F-220ENST00000434407 884 ntBASIC18.41■□□□□ 0.54
IFT43Q96FT9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 NPAP1P7-201ENST00000613027 823 ntBASIC18.41■□□□□ 0.54
IFT43Q96FT9 AC079602.3-201ENST00000623931 403 ntBASIC18.41■□□□□ 0.54
IFT43Q96FT9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms