Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 FAAHP1-202ENST00000446499 1238 ntBASIC17.25■□□□□ 0.35
RNF31Q96EP0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 AL160237.2-201ENST00000556165 472 ntBASIC17.25■□□□□ 0.35
RNF31Q96EP0 AC009065.1-201ENST00000564055 1225 ntBASIC17.25■□□□□ 0.35
RNF31Q96EP0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 SLC25A6P4-201ENST00000586535 553 ntBASIC17.25■□□□□ 0.35
RNF31Q96EP0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 AL022342.1-201ENST00000400363 863 ntBASIC17.24■□□□□ 0.35
RNF31Q96EP0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 VENTXP7-201ENST00000475503 772 ntBASIC17.24■□□□□ 0.35
RNF31Q96EP0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF31Q96EP0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RNF31Q96EP0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 CROCCP3-202ENST00000420820 1947 ntBASIC17.23■□□□□ 0.35
RNF31Q96EP0 PKD1P1-201ENST00000458669 6805 ntBASIC17.23■□□□□ 0.35
RNF31Q96EP0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RNF31Q96EP0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF31Q96EP0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF31Q96EP0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF31Q96EP0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 AP000593.1-201ENST00000393668 712 ntBASIC17.23■□□□□ 0.35
RNF31Q96EP0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF31Q96EP0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF31Q96EP0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF31Q96EP0 AC148477.8-201ENST00000624298 468 ntBASIC17.23■□□□□ 0.35
RNF31Q96EP0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF31Q96EP0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF31Q96EP0 AC135050.7-201ENST00000624508 2218 ntBASIC17.23■□□□□ 0.35
RNF31Q96EP0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms