Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL591684.3-201ENST00000605187 298 ntBASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.85■□□□□ 0.45
ECHDC3Q96DC8 NOC2LP1-202ENST00000452600 2235 ntBASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 AKR1C7P-201ENST00000305623 895 ntBASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 RN7SL510P-201ENST00000581311 263 ntBASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 REXO1L6P-202ENST00000619970 1078 ntBASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ECHDC3Q96DC8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ECHDC3Q96DC8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.83■□□□□ 0.45
ECHDC3Q96DC8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.83■□□□□ 0.45
ECHDC3Q96DC8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.83■□□□□ 0.45
ECHDC3Q96DC8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
ECHDC3Q96DC8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ECHDC3Q96DC8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ECHDC3Q96DC8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ECHDC3Q96DC8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ECHDC3Q96DC8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms