Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LINC01451-201ENST00000623792 534 ntBASIC17.02■□□□□ 0.32
LRRC58Q96CX6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC58Q96CX6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC58Q96CX6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC58Q96CX6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC58Q96CX6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC58Q96CX6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.02■□□□□ 0.31
LRRC58Q96CX6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC58Q96CX6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC58Q96CX6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC58Q96CX6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC58Q96CX6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC58Q96CX6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 SLC25A1P2-201ENST00000430693 912 ntBASIC17.01■□□□□ 0.31
LRRC58Q96CX6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 AC010240.3-201ENST00000607688 395 ntBASIC17.01■□□□□ 0.31
LRRC58Q96CX6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC58Q96CX6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
LRRC58Q96CX6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17■□□□□ 0.31
LRRC58Q96CX6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRRC58Q96CX6 REXO1L11P-201ENST00000620964 1927 ntBASIC17■□□□□ 0.31
LRRC58Q96CX6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LRRC58Q96CX6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17■□□□□ 0.31
LRRC58Q96CX6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17■□□□□ 0.31
LRRC58Q96CX6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17■□□□□ 0.31
LRRC58Q96CX6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
LRRC58Q96CX6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRRC58Q96CX6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17■□□□□ 0.31
LRRC58Q96CX6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17■□□□□ 0.31
LRRC58Q96CX6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRRC58Q96CX6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17■□□□□ 0.31
LRRC58Q96CX6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
LRRC58Q96CX6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC58Q96CX6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 LINC00167-201ENST00000530583 1419 ntBASIC16.99■□□□□ 0.31
LRRC58Q96CX6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.99■□□□□ 0.31
LRRC58Q96CX6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 AC116407.2-201ENST00000613639 860 ntBASIC16.99■□□□□ 0.31
LRRC58Q96CX6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC58Q96CX6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms