Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.22■□□□□ 0.67
SEMA4DQ92854 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 AL355312.1-201ENST00000407115 2176 ntBASIC19.22■□□□□ 0.67
SEMA4DQ92854 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 REXO1L11P-201ENST00000620964 1927 ntBASIC19.22■□□□□ 0.67
SEMA4DQ92854 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SEMA4DQ92854 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 TSSC2-201ENST00000450217 709 ntBASIC19.22■□□□□ 0.67
SEMA4DQ92854 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.22■□□□□ 0.67
SEMA4DQ92854 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4DQ92854 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SEMA4DQ92854 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SEMA4DQ92854 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.22■□□□□ 0.67
SEMA4DQ92854 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA4DQ92854 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA4DQ92854 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA4DQ92854 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA4DQ92854 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 AP005901.3-202ENST00000581653 237 ntBASIC19.21■□□□□ 0.67
SEMA4DQ92854 AC005336.2-201ENST00000593183 939 ntBASIC19.21■□□□□ 0.67
SEMA4DQ92854 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA4DQ92854 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA4DQ92854 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA4DQ92854 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SEMA4DQ92854 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA4DQ92854 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.2■□□□□ 0.66
SEMA4DQ92854 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 MIR3180-1-201ENST00000580374 94 ntBASIC19.19■□□□□ 0.66
SEMA4DQ92854 MIR3180-3-201ENST00000584616 94 ntBASIC19.19■□□□□ 0.66
SEMA4DQ92854 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.19■□□□□ 0.66
SEMA4DQ92854 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEMA4DQ92854 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 AC096633.1-201ENST00000422446 749 ntBASIC19.18■□□□□ 0.66
SEMA4DQ92854 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms