Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP6NLQ92738 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6NLQ92738 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
USP6NLQ92738 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.16■□□□□ 0.82
USP6NLQ92738 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
USP6NLQ92738 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.16■□□□□ 0.82
USP6NLQ92738 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP6NLQ92738 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
USP6NLQ92738 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.16■□□□□ 0.82
USP6NLQ92738 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6NLQ92738 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP6NLQ92738 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
USP6NLQ92738 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.16■□□□□ 0.82
USP6NLQ92738 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.16■□□□□ 0.82
USP6NLQ92738 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6NLQ92738 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP6NLQ92738 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USP6NLQ92738 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
USP6NLQ92738 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6NLQ92738 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
USP6NLQ92738 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
USP6NLQ92738 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USP6NLQ92738 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP6NLQ92738 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
USP6NLQ92738 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.15■□□□□ 0.82
USP6NLQ92738 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
USP6NLQ92738 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.15■□□□□ 0.82
USP6NLQ92738 CRYGEP-201ENST00000412192 528 ntBASIC20.15■□□□□ 0.82
USP6NLQ92738 VN2R19P-201ENST00000442399 1052 ntBASIC20.15■□□□□ 0.82
USP6NLQ92738 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
USP6NLQ92738 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.15■□□□□ 0.82
USP6NLQ92738 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.15■□□□□ 0.82
USP6NLQ92738 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 AL353593.2-201ENST00000602529 1483 ntBASIC20.15■□□□□ 0.82
USP6NLQ92738 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.15■□□□□ 0.82
USP6NLQ92738 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP6NLQ92738 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.15■□□□□ 0.82
USP6NLQ92738 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP6NLQ92738 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP6NLQ92738 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
USP6NLQ92738 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
USP6NLQ92738 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP6NLQ92738 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.14■□□□□ 0.81
USP6NLQ92738 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP6NLQ92738 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
USP6NLQ92738 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.14■□□□□ 0.81
USP6NLQ92738 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.14■□□□□ 0.81
USP6NLQ92738 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
USP6NLQ92738 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
USP6NLQ92738 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP6NLQ92738 AL020989.1-201ENST00000422979 469 ntBASIC20.14■□□□□ 0.81
USP6NLQ92738 AC108073.2-201ENST00000464002 357 ntBASIC20.14■□□□□ 0.81
USP6NLQ92738 IGHV3-65-201ENST00000523210 341 ntBASIC20.14■□□□□ 0.81
USP6NLQ92738 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.14■□□□□ 0.81
USP6NLQ92738 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
USP6NLQ92738 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP6NLQ92738 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP6NLQ92738 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.14■□□□□ 0.81
USP6NLQ92738 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP6NLQ92738 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
USP6NLQ92738 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
USP6NLQ92738 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6NLQ92738 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.13■□□□□ 0.81
USP6NLQ92738 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6NLQ92738 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.13■□□□□ 0.81
USP6NLQ92738 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6NLQ92738 HTR5BP-201ENST00000430851 1154 ntBASIC20.13■□□□□ 0.81
USP6NLQ92738 PRSS29P-201ENST00000440800 595 ntBASIC20.13■□□□□ 0.81
USP6NLQ92738 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.13■□□□□ 0.81
USP6NLQ92738 SNHG9-202ENST00000564014 471 ntBASIC20.13■□□□□ 0.81
USP6NLQ92738 MIR3197-201ENST00000582241 73 ntBASIC20.13■□□□□ 0.81
USP6NLQ92738 AL513190.1-201ENST00000621254 727 ntBASIC20.13■□□□□ 0.81
USP6NLQ92738 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.13■□□□□ 0.81
USP6NLQ92738 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
USP6NLQ92738 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6NLQ92738 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6NLQ92738 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6NLQ92738 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6NLQ92738 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6NLQ92738 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP6NLQ92738 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.13■□□□□ 0.81
USP6NLQ92738 AL049757.1-201ENST00000616842 1596 ntBASIC20.12■□□□□ 0.81
USP6NLQ92738 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6NLQ92738 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP6NLQ92738 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.12■□□□□ 0.81
USP6NLQ92738 AC018445.3-201ENST00000624177 1945 ntBASIC20.12■□□□□ 0.81
USP6NLQ92738 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP6NLQ92738 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
USP6NLQ92738 AC132938.5-201ENST00000624980 1813 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms