Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 MCCD1P2-201ENST00000423228 335 ntBASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 NCF1C-201ENST00000438382 1427 ntBASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 CRYGEP-201ENST00000412192 528 ntBASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 KLF4P1-201ENST00000412782 1185 ntBASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 HMGN1P19-201ENST00000436976 333 ntBASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 AC027796.2-201ENST00000575326 344 ntBASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 AL355385.1-201ENST00000606123 409 ntBASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAPGEF4Q8WZA2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 AC108073.2-201ENST00000464002 357 ntBASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RAPGEF4Q8WZA2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 AC002310.6-201ENST00000624451 1377 ntBASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 FUT8-AS1-201ENST00000621019 1521 ntBASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 AC003669.1-201ENST00000334569 611 ntBASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 AP006288.1-201ENST00000446065 395 ntBASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 AC005829.1-201ENST00000570002 483 ntBASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 MIR4751-201ENST00000578027 74 ntBASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF4Q8WZA2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 SIGLEC30P-201ENST00000455569 941 ntBASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms