Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 NPAP1P7-201ENST00000613027 823 ntBASIC18.12■□□□□ 0.49
PTCD2Q8WV60 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 AC016734.2-201ENST00000624325 1377 ntBASIC18.12■□□□□ 0.49
PTCD2Q8WV60 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCD2Q8WV60 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 KRT18P65-201ENST00000439811 1286 ntBASIC18.11■□□□□ 0.49
PTCD2Q8WV60 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 LINC00602-201ENST00000629776 2065 ntBASIC18.11■□□□□ 0.49
PTCD2Q8WV60 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCD2Q8WV60 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 AP002383.4-201ENST00000442518 975 ntBASIC18.1■□□□□ 0.49
PTCD2Q8WV60 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 AC092119.3-201ENST00000612618 583 ntBASIC18.1■□□□□ 0.49
PTCD2Q8WV60 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.1■□□□□ 0.49
PTCD2Q8WV60 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 AC012317.2-201ENST00000623305 2251 ntBASIC18.1■□□□□ 0.49
PTCD2Q8WV60 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTCD2Q8WV60 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 HCG4P8-203ENST00000443049 980 ntBASIC18.09■□□□□ 0.49
PTCD2Q8WV60 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 KRT18P56-201ENST00000507275 550 ntBASIC18.09■□□□□ 0.49
PTCD2Q8WV60 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCD2Q8WV60 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms