Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.58■□□□□ 0.25
CT55Q8WUE5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CT55Q8WUE5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.58■□□□□ 0.25
CT55Q8WUE5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 AC005104.2-201ENST00000427818 678 ntBASIC16.58■□□□□ 0.24
CT55Q8WUE5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 AC010327.4-202ENST00000591484 748 ntBASIC16.58■□□□□ 0.24
CT55Q8WUE5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CT55Q8WUE5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CT55Q8WUE5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 AC073621.1-201ENST00000392730 636 ntBASIC16.57■□□□□ 0.24
CT55Q8WUE5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 AL020989.1-201ENST00000422979 469 ntBASIC16.57■□□□□ 0.24
CT55Q8WUE5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 AC040169.1-201ENST00000565382 521 ntBASIC16.57■□□□□ 0.24
CT55Q8WUE5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 AL139424.1-201ENST00000607572 797 ntBASIC16.57■□□□□ 0.24
CT55Q8WUE5 AL691403.2-201ENST00000618460 490 ntBASIC16.57■□□□□ 0.24
CT55Q8WUE5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CT55Q8WUE5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.57■□□□□ 0.24
CT55Q8WUE5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CT55Q8WUE5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.56■□□□□ 0.24
CT55Q8WUE5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CT55Q8WUE5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CT55Q8WUE5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CT55Q8WUE5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms