Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 AC073592.5-201ENST00000624854 528 ntBASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3TC1Q8TE82 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 KRT18P3-201ENST00000451602 1288 ntBASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 AC006557.2-201ENST00000592985 1240 ntBASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 SIRPAP1-201ENST00000448467 1770 ntBASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 AL353593.2-201ENST00000602529 1483 ntBASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3TC1Q8TE82 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.15■■□□□ 1.14
SH3TC1Q8TE82 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms