Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AL391807.1-203ENST00000604392 2365 ntBASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 AC113404.2-201ENST00000507884 177 ntBASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 LINC00167-201ENST00000530583 1419 ntBASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 STARP1-201ENST00000397973 869 ntBASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 SPDYE15P-201ENST00000424157 909 ntBASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 KRT18P57-201ENST00000443599 1254 ntBASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 LINC01023-201ENST00000606054 436 ntBASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 LINC00896-202ENST00000609602 2128 ntBASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP1Q8TDR0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAF3IP1Q8TDR0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAF3IP1Q8TDR0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
TRAF3IP1Q8TDR0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.64■□□□□ 0.58
TRAF3IP1Q8TDR0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRAF3IP1Q8TDR0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 AC211429.1-201ENST00000415277 523 ntBASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 AC117947.1-201ENST00000427448 529 ntBASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 AC079602.3-201ENST00000623931 403 ntBASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 KRT89P-201ENST00000620027 1478 ntBASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 AC006116.8-202ENST00000587620 1550 ntBASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRAF3IP1Q8TDR0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms