Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDND2Q8NHS1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 AC009053.2-201ENST00000563701 2365 ntBASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 KRT17P6-201ENST00000453795 1220 ntBASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 KRT18P31-201ENST00000506277 1292 ntBASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDND2Q8NHS1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDND2Q8NHS1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 AC008764.6-201ENST00000595909 2069 ntBASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 AC112777.1-201ENST00000540175 1423 ntBASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 AC099343.3-201ENST00000605834 2503 ntBASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDND2Q8NHS1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms