Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.11■□□□□ 0.17
BBS1Q8NFJ9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
BBS1Q8NFJ9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 Z99916.2-201ENST00000604037 246 ntBASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS1Q8NFJ9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 UNC93B2-201ENST00000285383 730 ntBASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 CCR12P-201ENST00000446203 998 ntBASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 SEC1P-202ENST00000473944 940 ntBASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 LINC00167-201ENST00000530583 1419 ntBASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
BBS1Q8NFJ9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
BBS1Q8NFJ9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BBS1Q8NFJ9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
BBS1Q8NFJ9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
BBS1Q8NFJ9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.08■□□□□ 0.17
BBS1Q8NFJ9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BBS1Q8NFJ9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BBS1Q8NFJ9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BBS1Q8NFJ9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.08■□□□□ 0.17
BBS1Q8NFJ9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 TNRC18P3-201ENST00000441896 2691 ntBASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms