Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
NUP35Q8NFH5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 AL513477.1-201ENST00000602865 2407 ntBASIC13.38□□□□□ -0.27
NUP35Q8NFH5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 AC060834.1-201ENST00000443027 2032 ntBASIC13.38□□□□□ -0.27
NUP35Q8NFH5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 AC034236.2-201ENST00000606662 1610 ntBASIC13.38□□□□□ -0.27
NUP35Q8NFH5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP35Q8NFH5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.37□□□□□ -0.27
NUP35Q8NFH5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 PCDHB17P-201ENST00000539533 2393 ntBASIC13.37□□□□□ -0.27
NUP35Q8NFH5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 AF201337.1-201ENST00000520239 748 ntBASIC13.37□□□□□ -0.27
NUP35Q8NFH5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 HLA-B-256ENST00000639848 1089 ntBASIC13.37□□□□□ -0.27
NUP35Q8NFH5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NUP35Q8NFH5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 446.8 ms