Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 AC010947.1-201ENST00000623454 693 ntBASIC18.57■□□□□ 0.56
CCDC89Q8N998 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 AC009053.2-201ENST00000563701 2365 ntBASIC18.57■□□□□ 0.56
CCDC89Q8N998 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 KRT8P9-201ENST00000558927 1449 ntBASIC18.57■□□□□ 0.56
CCDC89Q8N998 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC89Q8N998 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 AC022898.2-201ENST00000616822 1312 ntBASIC18.56■□□□□ 0.56
CCDC89Q8N998 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 MMP23A-201ENST00000234610 1017 ntBASIC18.56■□□□□ 0.56
CCDC89Q8N998 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 HMGA1P5-201ENST00000412453 271 ntBASIC18.56■□□□□ 0.56
CCDC89Q8N998 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 NEK4P2-201ENST00000580004 1012 ntBASIC18.56■□□□□ 0.56
CCDC89Q8N998 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 AC133963.1-201ENST00000504166 1679 ntBASIC18.56■□□□□ 0.56
CCDC89Q8N998 AC132938.6-201ENST00000623828 1655 ntBASIC18.56■□□□□ 0.56
CCDC89Q8N998 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC89Q8N998 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC89Q8N998 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 AL138688.1-201ENST00000624851 1594 ntBASIC18.55■□□□□ 0.56
CCDC89Q8N998 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.55■□□□□ 0.56
CCDC89Q8N998 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 TSPY15P-201ENST00000457163 923 ntBASIC18.55■□□□□ 0.56
CCDC89Q8N998 ECEL1P2-202ENST00000465689 757 ntBASIC18.55■□□□□ 0.56
CCDC89Q8N998 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms