Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 PP12613-201ENST00000424958 2230 ntBASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 MESTP1-201ENST00000404287 994 ntBASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 LIN28AP1-201ENST00000429574 405 ntBASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 KRT18P55-202ENST00000578578 1546 ntBASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEPDC4Q8N2C3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 AL356309.3-201ENST00000624132 1934 ntBASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 CCR12P-201ENST00000446203 998 ntBASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 EGLN1P1-201ENST00000531623 762 ntBASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEPDC4Q8N2C3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
DEPDC4Q8N2C3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEPDC4Q8N2C3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms