Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 AC116407.2-201ENST00000613639 860 ntBASIC17.29■□□□□ 0.36
KRT78Q8N1N4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 AL645929.1-201ENST00000420084 975 ntBASIC17.28■□□□□ 0.36
KRT78Q8N1N4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 AL590326.2-201ENST00000625139 305 ntBASIC17.28■□□□□ 0.36
KRT78Q8N1N4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 GNAS-203ENST00000306120 1878 ntBASIC17.28■□□□□ 0.36
KRT78Q8N1N4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT78Q8N1N4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 AC068880.1-201ENST00000507289 2297 ntBASIC17.27■□□□□ 0.36
KRT78Q8N1N4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT78Q8N1N4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.27■□□□□ 0.35
KRT78Q8N1N4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.27■□□□□ 0.35
KRT78Q8N1N4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.27■□□□□ 0.35
KRT78Q8N1N4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
KRT78Q8N1N4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
KRT78Q8N1N4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
KRT78Q8N1N4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
KRT78Q8N1N4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT78Q8N1N4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT78Q8N1N4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms