Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 AC063952.2-201ENST00000498792 1227 ntBASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 VENTXP5-201ENST00000523979 775 ntBASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 AC004263.2-201ENST00000617183 678 ntBASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 HYMAI.1-201ENST00000620949 238 ntBASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 TMPOP1-202ENST00000424642 1267 ntBASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE9Q8IYJ1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
CPNE9Q8IYJ1 AC022898.2-201ENST00000616822 1312 ntBASIC17.71■□□□□ 0.42
CPNE9Q8IYJ1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPNE9Q8IYJ1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.71■□□□□ 0.42
CPNE9Q8IYJ1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPNE9Q8IYJ1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.71■□□□□ 0.42
CPNE9Q8IYJ1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 PCDHA12-202ENST00000613593 2588 ntBASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 DUX4L26-201ENST00000489078 1255 ntBASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 AC022616.7-201ENST00000525383 220 ntBASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 ZNF444P1-201ENST00000559497 298 ntBASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 LINC00896-202ENST00000609602 2128 ntBASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 LINC01311-201ENST00000565162 1445 ntBASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE9Q8IYJ1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms