Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN4BQ8IWT1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 FDX1P1-201ENST00000449115 551 ntBASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
SCN4BQ8IWT1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 AC007967.3-201ENST00000434308 558 ntBASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 AP002469.2-201ENST00000531724 424 ntBASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 AC008608.2-201ENST00000606089 416 ntBASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN4BQ8IWT1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms