Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 ECEL1P2-202ENST00000465689 757 ntBASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 SEC1P-202ENST00000473944 940 ntBASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC50Q8IVM0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 KRT18P55-202ENST00000578578 1546 ntBASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC50Q8IVM0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC50Q8IVM0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC50Q8IVM0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 AL512604.3-201ENST00000569583 964 ntBASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC50Q8IVM0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 AC006116.8-202ENST00000587620 1550 ntBASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms