Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RTTNQ86VV8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RTTNQ86VV8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.81■□□□□ 0.12
RTTNQ86VV8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.81■□□□□ 0.12
RTTNQ86VV8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RTTNQ86VV8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RTTNQ86VV8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RTTNQ86VV8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTTNQ86VV8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 MIR3180-1-201ENST00000580374 94 ntBASIC15.8■□□□□ 0.12
RTTNQ86VV8 MIR3180-3-201ENST00000584616 94 ntBASIC15.8■□□□□ 0.12
RTTNQ86VV8 AC132938.6-201ENST00000623828 1655 ntBASIC15.8■□□□□ 0.12
RTTNQ86VV8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 AC113404.2-201ENST00000507884 177 ntBASIC15.8■□□□□ 0.12
RTTNQ86VV8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 AL136038.3-201ENST00000561909 1096 ntBASIC15.8■□□□□ 0.12
RTTNQ86VV8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RTTNQ86VV8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 AC100803.2-201ENST00000562459 1963 ntBASIC15.8■□□□□ 0.12
RTTNQ86VV8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTTNQ86VV8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 AC079328.2-201ENST00000561241 3354 ntBASIC15.79■□□□□ 0.12
RTTNQ86VV8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 PCDHB18P-201ENST00000524813 2368 ntBASIC15.79■□□□□ 0.12
RTTNQ86VV8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 AC009065.1-201ENST00000564055 1225 ntBASIC15.79■□□□□ 0.12
RTTNQ86VV8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.79■□□□□ 0.12
RTTNQ86VV8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTTNQ86VV8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms