Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 AC021087.4-201ENST00000563761 564 ntBASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.06■□□□□ 0.64
DCLRE1AQ6PJP8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 AC103564.2-201ENST00000432853 1299 ntBASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 HNRNPDP1-201ENST00000439535 754 ntBASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DCLRE1AQ6PJP8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 IL9RP2-201ENST00000423948 1312 ntBASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 NKAPP1-205ENST00000585790 367 ntBASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 AL139288.1-201ENST00000623748 933 ntBASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 FAM215A-202ENST00000632077 792 ntBASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.04■□□□□ 0.64
DCLRE1AQ6PJP8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 AD001527.2-201ENST00000622994 785 ntBASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms