Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND1BQ6P3S1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.92■□□□□ 0.62
DENND1BQ6P3S1 GNAS-203ENST00000306120 1878 ntBASIC18.92■□□□□ 0.62
DENND1BQ6P3S1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DENND1BQ6P3S1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND1BQ6P3S1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.92■□□□□ 0.62
DENND1BQ6P3S1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DENND1BQ6P3S1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND1BQ6P3S1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND1BQ6P3S1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND1BQ6P3S1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 AL353801.3-201ENST00000609898 542 ntBASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 KRT18P1-202ENST00000452408 1331 ntBASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND1BQ6P3S1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DENND1BQ6P3S1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
DENND1BQ6P3S1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.89■□□□□ 0.62
DENND1BQ6P3S1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.89■□□□□ 0.62
DENND1BQ6P3S1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DENND1BQ6P3S1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 AP002414.4-201ENST00000589764 1148 ntBASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
DENND1BQ6P3S1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.88■□□□□ 0.61
DENND1BQ6P3S1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.88■□□□□ 0.61
DENND1BQ6P3S1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DENND1BQ6P3S1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
DENND1BQ6P3S1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DENND1BQ6P3S1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DENND1BQ6P3S1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DENND1BQ6P3S1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms