Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 RCC2P3-201ENST00000418112 1537 ntBASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 MCCD1P1-208ENST00000445732 328 ntBASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM53Q6P2H8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 HEIH-201ENST00000623091 1652 ntBASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 PCDHB17P-201ENST00000539533 2393 ntBASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 AL023803.3-201ENST00000615559 522 ntBASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 AC010653.2-201ENST00000623505 997 ntBASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 AC073912.3-201ENST00000624414 853 ntBASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 KRT8P9-201ENST00000558927 1449 ntBASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 DOC2GP-204ENST00000639052 2548 ntBASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMEM53Q6P2H8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms