Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 AL662844.1-201ENST00000546340 181 ntBASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.86■□□□□ 0.77
SWSAP1Q6NVH7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 BICD1-207ENST00000551848 1962 ntBASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 COX5BP2-201ENST00000392354 334 ntBASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 AC122714.2-201ENST00000502787 707 ntBASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 AC079776.4-201ENST00000511039 504 ntBASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SWSAP1Q6NVH7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 HLA-A-201ENST00000376802 1334 ntBASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 AC009949.1-201ENST00000623048 1830 ntBASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SWSAP1Q6NVH7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms