Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTL6Q6ICC9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 HLA-A-201ENST00000376802 1334 ntBASIC16.14■□□□□ 0.17
RTL6Q6ICC9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTL6Q6ICC9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 RCN1P2-201ENST00000398357 915 ntBASIC16.13■□□□□ 0.17
RTL6Q6ICC9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 AC079776.4-201ENST00000511039 504 ntBASIC16.13■□□□□ 0.17
RTL6Q6ICC9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTL6Q6ICC9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 LINC00602-201ENST00000629776 2065 ntBASIC16.12■□□□□ 0.17
RTL6Q6ICC9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL6Q6ICC9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms