Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 FP475955.4-201ENST00000623131 1990 ntBASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 KRT18P32-201ENST00000424695 1287 ntBASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 AL592309.1-201ENST00000443127 649 ntBASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 GPR53P-205ENST00000457298 1084 ntBASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 AL805961.1-202ENST00000641562 540 ntBASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 AC008677.1-201ENST00000519230 1561 ntBASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H2BCQ6DN03 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 AL671277.1-201ENST00000429656 993 ntBASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 GPS2P2-201ENST00000430745 888 ntBASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 RBPMS2P1-201ENST00000437762 623 ntBASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 SPDYE11-202ENST00000450699 704 ntBASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 SPDYE9P-201ENST00000570642 692 ntBASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 SPDYE10P-202ENST00000612005 668 ntBASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 SPDYE8P-202ENST00000612377 668 ntBASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms