Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.28■□□□□ 0.36
RNF220Q5VTB9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 AC096733.2-201ENST00000609937 1394 ntBASIC17.28■□□□□ 0.36
RNF220Q5VTB9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 AC093677.2-201ENST00000600169 1863 ntBASIC17.27■□□□□ 0.36
RNF220Q5VTB9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF220Q5VTB9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 REXO1L9P-201ENST00000604264 2108 ntBASIC17.27■□□□□ 0.35
RNF220Q5VTB9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF220Q5VTB9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 RPS2P55-201ENST00000397318 883 ntBASIC17.26■□□□□ 0.35
RNF220Q5VTB9 AC107956.1-201ENST00000494359 873 ntBASIC17.26■□□□□ 0.35
RNF220Q5VTB9 AC116562.2-201ENST00000507042 360 ntBASIC17.26■□□□□ 0.35
RNF220Q5VTB9 NUDT16P1-203ENST00000513809 620 ntBASIC17.26■□□□□ 0.35
RNF220Q5VTB9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 AP001412.1-201ENST00000608405 714 ntBASIC17.26■□□□□ 0.35
RNF220Q5VTB9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 MYC-208ENST00000641036 567 ntBASIC17.26■□□□□ 0.35
RNF220Q5VTB9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RNF220Q5VTB9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF220Q5VTB9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms