Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM27BQ5VT28 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM27BQ5VT28 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM27BQ5VT28 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM27BQ5VT28 AC005332.8-201ENST00000622750 2735 ntBASIC15.66■□□□□ 0.1
FAM27BQ5VT28 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM27BQ5VT28 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM27BQ5VT28 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 LINC00896-202ENST00000609602 2128 ntBASIC15.65■□□□□ 0.1
FAM27BQ5VT28 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 AC116407.4-201ENST00000623319 1061 ntBASIC15.65■□□□□ 0.1
FAM27BQ5VT28 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 AC097374.2-201ENST00000618617 1306 ntBASIC15.65■□□□□ 0.1
FAM27BQ5VT28 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM27BQ5VT28 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 AL353801.3-201ENST00000609898 542 ntBASIC15.64■□□□□ 0.09
FAM27BQ5VT28 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FAM27BQ5VT28 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.63■□□□□ 0.09
FAM27BQ5VT28 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms