Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 HLA-L-209ENST00000420110 1011 ntBASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 AC116562.2-201ENST00000507042 360 ntBASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 AC104390.1-201ENST00000555663 520 ntBASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 CROCCP1-201ENST00000426910 5675 ntBASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 RPPH1-201ENST00000516869 333 ntBASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 KRT18P6-201ENST00000555540 1265 ntBASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 WWOX-216ENST00000569818 525 ntBASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 CD177P1-201ENST00000606252 935 ntBASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00242Q5T6M2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LINC00242Q5T6M2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms