Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 AC132008.2-207ENST00000454517 770 ntBASIC21.79■■□□□ 1.08
TNNI3KQ59H18 EMBP1-201ENST00000458200 901 ntBASIC21.79■■□□□ 1.08
TNNI3KQ59H18 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 AL691432.3-201ENST00000621860 400 ntBASIC21.79■■□□□ 1.08
TNNI3KQ59H18 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 AC007613.1-201ENST00000572811 2597 ntBASIC21.79■■□□□ 1.08
TNNI3KQ59H18 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 AC122714.2-201ENST00000502787 707 ntBASIC21.78■■□□□ 1.08
TNNI3KQ59H18 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 REXO1L6P-202ENST00000619970 1078 ntBASIC21.78■■□□□ 1.08
TNNI3KQ59H18 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TNNI3KQ59H18 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.77■■□□□ 1.08
TNNI3KQ59H18 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.77■■□□□ 1.07
TNNI3KQ59H18 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TNNI3KQ59H18 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
TNNI3KQ59H18 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
TNNI3KQ59H18 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
TNNI3KQ59H18 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TNNI3KQ59H18 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
TNNI3KQ59H18 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNNI3KQ59H18 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNNI3KQ59H18 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNNI3KQ59H18 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNNI3KQ59H18 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNNI3KQ59H18 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
TNNI3KQ59H18 SLC25A6P5-201ENST00000435663 894 ntBASIC21.76■■□□□ 1.07
TNNI3KQ59H18 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms