Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 CHCHD2P8-201ENST00000429873 447 ntBASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 AP002383.4-201ENST00000442518 975 ntBASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 AC116407.2-201ENST00000613639 860 ntBASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 AL355312.1-201ENST00000407115 2176 ntBASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 DDX43P3-201ENST00000441064 443 ntBASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 TSSC2-201ENST00000450217 709 ntBASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 AC091607.1-201ENST00000490318 1060 ntBASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PTPN20Q4JDL3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 REXO1L11P-201ENST00000620964 1927 ntBASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 AC005336.2-201ENST00000593183 939 ntBASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN20Q4JDL3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PTPN20Q4JDL3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms