Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL20P78556 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCL20P78556 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL20P78556 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CCL20P78556 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL20P78556 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL20P78556 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCL20P78556 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CCL20P78556 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.09□□□□□ -0.15
CCL20P78556 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.09□□□□□ -0.15
CCL20P78556 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCL20P78556 AC231657.2-201ENST00000624556 255 ntBASIC14.09□□□□□ -0.15
CCL20P78556 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 AL109659.2-201ENST00000606809 1674 ntBASIC14.09□□□□□ -0.15
CCL20P78556 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCL20P78556 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 AC092171.3-201ENST00000610122 2651 ntBASIC14.09□□□□□ -0.15
CCL20P78556 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCL20P78556 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL20P78556 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CCL20P78556 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
CCL20P78556 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCL20P78556 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL20P78556 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCL20P78556 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.08□□□□□ -0.15
CCL20P78556 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCL20P78556 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCL20P78556 AC023824.1-201ENST00000562945 2975 ntBASIC14.08□□□□□ -0.16
CCL20P78556 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL20P78556 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCL20P78556 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 AL662844.4-201ENST00000606367 2838 ntBASIC14.08□□□□□ -0.16
CCL20P78556 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL20P78556 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.08□□□□□ -0.16
CCL20P78556 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL20P78556 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.08□□□□□ -0.16
CCL20P78556 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL20P78556 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL20P78556 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.08□□□□□ -0.16
CCL20P78556 C1QL1P1-201ENST00000568105 661 ntBASIC14.08□□□□□ -0.16
CCL20P78556 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 AC005837.3-201ENST00000612163 286 ntBASIC14.08□□□□□ -0.16
CCL20P78556 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 TSPY26P-202ENST00000565928 3884 ntBASIC14.08□□□□□ -0.16
CCL20P78556 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CCL20P78556 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CCL20P78556 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL20P78556 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL20P78556 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CCL20P78556 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL20P78556 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms