Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN20P56880 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CLDN20P56880 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN20P56880 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN20P56880 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN20P56880 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.4■□□□□ 0.22
CLDN20P56880 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN20P56880 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN20P56880 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.4■□□□□ 0.22
CLDN20P56880 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN20P56880 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN20P56880 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 IGHGP-201ENST00000390555 1178 ntBASIC16.4■□□□□ 0.22
CLDN20P56880 TSPY22P-201ENST00000427496 604 ntBASIC16.4■□□□□ 0.22
CLDN20P56880 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLDN20P56880 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN20P56880 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN20P56880 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN20P56880 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.4■□□□□ 0.22
CLDN20P56880 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN20P56880 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 AC069148.1-201ENST00000608741 768 ntBASIC16.4■□□□□ 0.22
CLDN20P56880 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLDN20P56880 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN20P56880 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN20P56880 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN20P56880 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN20P56880 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CLDN20P56880 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN20P56880 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN20P56880 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN20P56880 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN20P56880 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN20P56880 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 BX276092.5-203ENST00000456199 560 ntBASIC16.39■□□□□ 0.21
CLDN20P56880 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN20P56880 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN20P56880 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN20P56880 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN20P56880 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN20P56880 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN20P56880 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.39■□□□□ 0.21
CLDN20P56880 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN20P56880 GPR32P1-201ENST00000601788 811 ntBASIC16.39■□□□□ 0.21
CLDN20P56880 AL390719.2-201ENST00000606993 987 ntBASIC16.39■□□□□ 0.21
CLDN20P56880 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN20P56880 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN20P56880 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN20P56880 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 KRT89P-201ENST00000620027 1478 ntBASIC16.39■□□□□ 0.21
CLDN20P56880 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN20P56880 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CLDN20P56880 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CLDN20P56880 AL139384.1-201ENST00000612143 3047 ntBASIC16.39■□□□□ 0.21
CLDN20P56880 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN20P56880 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN20P56880 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN20P56880 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN20P56880 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 AC016734.2-201ENST00000624325 1377 ntBASIC16.38■□□□□ 0.21
CLDN20P56880 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN20P56880 GMCL1P1-201ENST00000463439 1581 ntBASIC16.38■□□□□ 0.21
CLDN20P56880 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms