Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SH3BGRP55822 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH3BGRP55822 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH3BGRP55822 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.11■□□□□ 0.33
SH3BGRP55822 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.11■□□□□ 0.33
SH3BGRP55822 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH3BGRP55822 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.11■□□□□ 0.33
SH3BGRP55822 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SH3BGRP55822 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH3BGRP55822 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SH3BGRP55822 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.11■□□□□ 0.33
SH3BGRP55822 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH3BGRP55822 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH3BGRP55822 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
SH3BGRP55822 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH3BGRP55822 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.11■□□□□ 0.33
SH3BGRP55822 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SH3BGRP55822 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH3BGRP55822 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH3BGRP55822 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
SH3BGRP55822 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SH3BGRP55822 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SH3BGRP55822 NIFKP9-201ENST00000419265 221 ntBASIC17.1■□□□□ 0.33
SH3BGRP55822 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3BGRP55822 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3BGRP55822 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3BGRP55822 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SH3BGRP55822 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SH3BGRP55822 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SH3BGRP55822 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3BGRP55822 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SH3BGRP55822 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3BGRP55822 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SH3BGRP55822 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SH3BGRP55822 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3BGRP55822 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3BGRP55822 KSR1P1-201ENST00000446298 240 ntBASIC17.09■□□□□ 0.33
SH3BGRP55822 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 AC008550.1-201ENST00000511500 884 ntBASIC17.09■□□□□ 0.33
SH3BGRP55822 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.09■□□□□ 0.33
SH3BGRP55822 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3BGRP55822 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.09■□□□□ 0.33
SH3BGRP55822 AF186192.3-201ENST00000583427 947 ntBASIC17.09■□□□□ 0.33
SH3BGRP55822 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3BGRP55822 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3BGRP55822 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3BGRP55822 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3BGRP55822 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3BGRP55822 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SH3BGRP55822 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3BGRP55822 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.09■□□□□ 0.33
SH3BGRP55822 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.09■□□□□ 0.33
SH3BGRP55822 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3BGRP55822 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SH3BGRP55822 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3BGRP55822 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SH3BGRP55822 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SH3BGRP55822 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3BGRP55822 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3BGRP55822 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3BGRP55822 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3BGRP55822 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SH3BGRP55822 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3BGRP55822 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.08■□□□□ 0.33
SH3BGRP55822 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3BGRP55822 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH3BGRP55822 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.08■□□□□ 0.33
SH3BGRP55822 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms