Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.09■□□□□ 0.81
EPHB4P54760 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.09■□□□□ 0.81
EPHB4P54760 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.09■□□□□ 0.81
EPHB4P54760 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.09■□□□□ 0.81
EPHB4P54760 AC034105.1-201ENST00000563488 319 ntBASIC20.09■□□□□ 0.81
EPHB4P54760 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
EPHB4P54760 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHB4P54760 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB4P54760 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.09■□□□□ 0.81
EPHB4P54760 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHB4P54760 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.09■□□□□ 0.81
EPHB4P54760 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHB4P54760 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHB4P54760 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB4P54760 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHB4P54760 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
EPHB4P54760 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB4P54760 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB4P54760 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB4P54760 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.08■□□□□ 0.81
EPHB4P54760 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB4P54760 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB4P54760 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB4P54760 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.08■□□□□ 0.81
EPHB4P54760 KRT89P-201ENST00000620027 1478 ntBASIC20.08■□□□□ 0.81
EPHB4P54760 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.08■□□□□ 0.81
EPHB4P54760 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB4P54760 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.08■□□□□ 0.81
EPHB4P54760 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB4P54760 MED15P5-201ENST00000423150 992 ntBASIC20.08■□□□□ 0.81
EPHB4P54760 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
EPHB4P54760 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.08■□□□□ 0.81
EPHB4P54760 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.08■□□□□ 0.81
EPHB4P54760 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
EPHB4P54760 AP001269.4-201ENST00000609611 512 ntBASIC20.08■□□□□ 0.81
EPHB4P54760 FAM197Y3-203ENST00000618346 717 ntBASIC20.08■□□□□ 0.81
EPHB4P54760 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
EPHB4P54760 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EPHB4P54760 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.08■□□□□ 0.8
EPHB4P54760 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.08■□□□□ 0.8
EPHB4P54760 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EPHB4P54760 AC034236.2-201ENST00000606662 1610 ntBASIC20.08■□□□□ 0.8
EPHB4P54760 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
EPHB4P54760 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.08■□□□□ 0.8
EPHB4P54760 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
EPHB4P54760 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.08■□□□□ 0.8
EPHB4P54760 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.08■□□□□ 0.8
EPHB4P54760 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
EPHB4P54760 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
EPHB4P54760 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.07■□□□□ 0.8
EPHB4P54760 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.07■□□□□ 0.8
EPHB4P54760 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.07■□□□□ 0.8
EPHB4P54760 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB4P54760 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB4P54760 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
EPHB4P54760 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
EPHB4P54760 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 YBX2P1-201ENST00000394192 760 ntBASIC20.06■□□□□ 0.8
EPHB4P54760 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.06■□□□□ 0.8
EPHB4P54760 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EPHB4P54760 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.06■□□□□ 0.8
EPHB4P54760 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.06■□□□□ 0.8
EPHB4P54760 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
EPHB4P54760 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.06■□□□□ 0.8
EPHB4P54760 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EPHB4P54760 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB4P54760 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.06■□□□□ 0.8
EPHB4P54760 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms